Proper working implementation of a cycle detection algorithm, that
returns the cycles (rather than printing them) by constructing the
path between the two nodes that were found to be cyclic.
Patch by: Sverre Rabbelier
# Copyright (c) 2007-2008 Pedro Matiello <pmatiello@gmail.com>
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"""
Accessibility algorithms for python-graph.
@sort: accessibility, connected_components, cut_edges, cut_nodes, mutual_accessibility
"""
# Transitive-closure
def accessibility(graph):
"""
Accessibility matrix (transitive closure).
@type graph: graph
@param graph: Graph.
@rtype: dictionary
@return: Accessibility information for each node.
"""
accessibility = {} # Accessibility matrix
# For each node i, mark each node j if that exists a path from i to j.
for each in graph:
access = {}
# Perform DFS to explore all reachable nodes
_dfs(graph, access, 1, each)
accessibility[each] = access.keys()
return accessibility
# Strongly connected components
def mutual_accessibility(graph):
"""
Mutual-accessibility matrix (strongly connected components).
@type graph: graph
@param graph: Graph.
@rtype: dictionary
@return: Mutual-accessibility information for each node.
"""
mutual_access = {}
access = graph.accessibility()
for i in graph:
mutual_access[i] = []
for j in graph:
if (i in access[j] and j in access[i]):
mutual_access[i].append(j)
return mutual_access
# Connected components
def connected_components(graph):
"""
Connected components.
@attention: Indentification of connected components is meaningful only for non-directed graphs.
@type graph: graph
@param graph: Graph.
@rtype: dictionary
@return: Pairing that associates each node to its connected component.
"""
visited = {}
count = 1
# For 'each' node not found to belong to a connected component, find its connected component.
for each in graph:
if (each not in visited):
_dfs(graph, visited, count, each)
count = count + 1
return visited
# Limited DFS implementations used by algorithms here
def _dfs(graph, visited, count, node):
"""
Depht-first search subfunction adapted for accessibility algorithms.
@type graph: graph
@param graph: Graph.
@type visited: dictionary
@param visited: List of nodes (visited nodes are marked non-zero).
@type count: number
@param count: Counter of connected components.
@type node: number
@param node: Node to be explored by DFS.
"""
visited[node] = count
# Explore recursively the connected component
for each in graph[node]:
if (each not in visited):
_dfs(graph, visited, count, each)
# Cut-Edge and Cut-Vertex identification
def cut_edges(graph):
"""
Return the cut-edges of the given graph.
@rtype: list
@return: List of cut-edges.
"""
pre = {}
low = {}
spanning_tree = {}
reply = []
pre[None] = 0
for each in graph:
if (not pre.has_key(each)):
spanning_tree[each] = None
_cut_dfs(graph, spanning_tree, pre, low, reply, each)
return reply
def cut_nodes(graph):
"""
Return the cut-nodes of the given graph.
@rtype: list
@return: List of cut-nodes.
"""
pre = {} # Pre-ordering
low = {} # Lowest pre[] reachable from this node going down the spanning tree + one backedge
reply = {}
spanning_tree = {}
pre[None] = 0
# Create spanning trees, calculate pre[], low[]
for each in graph:
if (not pre.has_key(each)):
spanning_tree[each] = None
_cut_dfs(graph, spanning_tree, pre, low, [], each)
# Find cuts
for each in graph:
# If node is not a root
if (spanning_tree[each] is not None):
for other in graph[each]:
# If there is no back-edge from descendent to a ancestral of each
if (low[other] >= pre[each] and spanning_tree[other] == each):
reply[each] = 1
# If node is a root
else:
children = 0
for other in graph:
if (spanning_tree[other] == each):
children = children + 1
# root is cut-vertex iff it has two or more children
if (children >= 2):
reply[each] = 1
return reply.keys()
def _cut_dfs(graph, spanning_tree, pre, low, reply, node):
"""
Depth first search adapted for identification of cut-edges and cut-nodes.
@type graph: graph
@param graph: Graph
@type spanning_tree: dictionary
@param spanning_tree: Spanning tree being built for the graph by DFS.
@type pre: dictionary
@param pre: Graph's preordering.
@type low: dictionary
@param low: Associates to each node, the preordering index of the node of lowest preordering
accessible from the given node.
@type reply: list
@param reply: List of cut-edges.
@type node: node
@param node: Node to be explored by DFS.
"""
pre[node] = pre[None]
low[node] = pre[None]
pre[None] = pre[None] + 1
for each in graph[node]:
if (not pre.has_key(each)):
spanning_tree[each] = node
_cut_dfs(graph, spanning_tree, pre, low, reply, each)
if (low[node] > low[each]):
low[node] = low[each]
if (low[each] == pre[each]):
reply.append((node, each))
elif (low[node] > pre[each] and spanning_tree[node] != each):
low[node] = pre[each]