author | amit |
Thu, 16 Sep 2010 19:40:33 +0530 | |
changeset 149 | b9ae88095ade |
parent 144 | 476ea1730aee |
child 192 | 3a839dca2bdb |
permissions | -rw-r--r-- |
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1 |
======== |
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2 |
Script |
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3 |
======== |
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4 |
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5 |
Welcome to this tutorial on loading data from files. |
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6 |
|
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7 |
{{{ Screen shows welcome slide }}} |
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8 |
|
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9 |
Until now, all the plots we have made use analytic functions. We have |
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10 |
been using analytic functions to generate a sequence of points and |
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11 |
plotting them, against another sequence of points. But, this is not |
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what we do most often. We often require to plot points obtained from |
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experimental observations. |
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|
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15 |
#[punch: the initial part of the paragraph may be removed, to make |
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this a more generic LO?] |
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|
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In this tutorial we shall learn to read data from files and save it |
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19 |
into sequences that can later be used to plot. |
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20 |
|
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21 |
{{{ Show the outline for this tutorial }}} |
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|
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We shall use the ``loadtxt`` command to load data from files. We will |
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be looking at how to get multiple columns of data into multiple |
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sequences. |
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|
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27 |
{{{ switch back to the terminal }}} |
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29 |
As usual, let us start IPython, using |
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:: |
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|
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ipython -pylab |
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34 |
Now, Let us begin with reading the file primes.txt, which contains |
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just a list of primes listed in a column, using the loadtxt command. |
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The file, in our case, is present in ``/home/fossee/primes.txt``. |
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#[punch: do we need a slide for showing the path?] |
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39 |
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We use the ``cat`` command to see the contents of this file. |
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#[punch: should we show the cat command here? seems like a good place |
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to do it] :: |
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cat /home/fossee/primes.txt |
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Now let us read this list into the variable ``primes``. |
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48 |
:: |
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primes = loadtxt('/home/fossee/primes.txt') |
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``primes`` is now a sequence of primes, that was listed in the file, |
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``primes.txt``. |
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We now type, ``print primes`` to see the sequence printed. |
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56 |
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We observe that all of the numbers end with a period. This is so, |
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because these numbers are actually read as ``floats``. We shall learn |
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59 |
about them, later. |
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Now, let us use the ``loadtxt`` command to read a file that contains |
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two columns of data, ``pendulum.txt``. This file contains the length |
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of the pendulum in the first column and the corresponding time period |
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in the second. |
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%%1%% Pause the video here, and use the ``cat`` command to view the |
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contents of this file and then resume the video. |
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This is how we look at the contents of the file, ``pendulum.txt`` |
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:: |
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cat /home/fossee/pendulum.txt |
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Let us, now, read the data into the variable ``pend``. Again, it is |
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assumed that the file is in ``/home/fossee/`` |
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:: |
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pend = loadtxt('/home/fossee/pendulum.txt') |
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Let us now print the variable ``pend`` and see what's in it. |
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81 |
:: |
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82 |
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print pend |
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84 |
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85 |
Notice that ``pend`` is not a simple sequence like ``primes``. It has |
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86 |
two sequences, containing both the columns of the data file. Let us |
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87 |
use an additional argument of the ``loadtxt`` command, to read it into |
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two separate, simple sequences. |
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89 |
:: |
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L, T = loadtxt('/home/fossee/pendulum.txt', unpack=True) |
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92 |
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Let us now, print the variables L and T, to see what they contain. |
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94 |
:: |
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95 |
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96 |
print L |
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97 |
print T |
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98 |
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99 |
Notice, that L and T now contain the first and second columns of data |
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100 |
from the data file, ``pendulum.txt``, and they are both simple |
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101 |
sequences. |
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102 |
|
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103 |
{{{ show the slide with loadtxt --- other features }}} |
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104 |
|
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105 |
In this tutorial, we have learnt the basic use of the ``loadtxt`` |
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106 |
command, which is capable of doing a lot more than we have used it for |
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107 |
until now, for example |
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108 |
|
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109 |
%%2%% Pause the video here, and read the file |
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110 |
``pendulum_semicolon.txt`` which contains the same data as |
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111 |
``pendulum.txt``, but the columns are separated by semi-colons instead |
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112 |
of spaces. Use the IPython help to see how to do this. Once you have |
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113 |
finished, resume the video to look at the solution. |
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114 |
|
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115 |
{{{ switch back to the terminal }}} |
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116 |
:: |
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117 |
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118 |
L, T = loadtxt('/home/fossee/pendulum.txt', unpack``True, delimiter``';') |
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119 |
|
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120 |
print L |
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121 |
|
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122 |
print T |
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123 |
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124 |
This brings us to the end of this tutorial. |
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125 |
|
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126 |
{{{ show the summary slide }}} |
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127 |
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128 |
You should now be able to do the following, comfortably. |
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129 |
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130 |
+ Read data from files, containing a single column of data using the |
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Added rst files for scripts.
Puneeth Chaganti <punchagan@gmail.com>
parents:
diff
changeset
|
131 |
``loadtxt`` command. |
476ea1730aee
Added rst files for scripts.
Puneeth Chaganti <punchagan@gmail.com>
parents:
diff
changeset
|
132 |
+ Read multiple columns of data, separated by spaces or other |
476ea1730aee
Added rst files for scripts.
Puneeth Chaganti <punchagan@gmail.com>
parents:
diff
changeset
|
133 |
delimiters. |
476ea1730aee
Added rst files for scripts.
Puneeth Chaganti <punchagan@gmail.com>
parents:
diff
changeset
|
134 |
|
476ea1730aee
Added rst files for scripts.
Puneeth Chaganti <punchagan@gmail.com>
parents:
diff
changeset
|
135 |
Thank you! |
476ea1730aee
Added rst files for scripts.
Puneeth Chaganti <punchagan@gmail.com>
parents:
diff
changeset
|
136 |
|
476ea1730aee
Added rst files for scripts.
Puneeth Chaganti <punchagan@gmail.com>
parents:
diff
changeset
|
137 |