# HG changeset patch # User nishanth # Date 1284714130 -19800 # Node ID 4032df8f6227101c600621230b1d7fe29277850b # Parent 234b393cbc85a9e16927b278c80f66976291a98a# Parent b9ae88095adeeb0ae6cc8f7589f09d3c999e27a2 merged changes by amit diff -r 234b393cbc85 -r 4032df8f6227 accessing-pieces-arrays.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/accessing-pieces-arrays.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,339 @@ +======== + Script +======== + + +{{{ Screen shows welcome slide }}} + +Welcome to the tutorial on accessing pieces of arrays + +{{{ Show the outline for this tutorial }}} + +In this tutorial we shall learn to access individual elements of +arrays, get rows and columns and other chunks of arrays using +slicing and striding. + +{{{ switch back to the terminal }}} + +As usual, we start IPython, using +:: + + ipython -pylab + +Let us have two arrays, A and C, as the sample arrays that we will +use to work through this tutorial. + +:: + + A = array([12, 23, 34, 45, 56]) + + C = array([[11, 12, 13, 14, 15], + [21, 22, 23, 24, 25], + [31, 32, 33, 34, 35], + [41, 42, 43, 44, 45], + [51, 52, 53, 54, 55]]) + +Pause the video here and make sure you have the arrays A and C, +typed in correctly. + +Let us begin with the most elementary thing, accessing individual +elements. Also, let us first do it with the one-dimensional array +A, and then do the same thing with the two-dimensional array. + +To access, the element 34 in A, we say, + +:: + + A[1] + +Like lists, indexing starts from 0 in arrays, too. So, 34, the +third element has the index 2. + +Now, let us access the element 34 from C. To do this, we say +:: + + C[2, 3] + +34 is in the third row and the fourth column, and since indexing +begins from zero, the row index is 2 and column index is 3. + +Now, that we have accessed one element of the array, let us change +it. We shall change the 34 to -34 in both A and C. To do this, we +simply assign the new value after accessing the element. +:: + + A[2] = -34 + C[2, 3] = -34 + +Now that we have accessed and changed a single element, let us +access and change more than one element at a time; first rows and +then columns. + +Let us access one row of C, say the third row. We do it by saying, +:: + + C[2] + +How do we access the last row of C? We could say, +:: + + C[4] + +for the fifth row, or as with lists, use negative indexing and say +:: + + C[-1] + +Now, we could change the last row into all zeros, using either +:: + + C[-1] = [0, 0, 0, 0, 0] + +or + +:: + + C[-1] = 0 + +Now, how do we access one column of C? As with accessing +individual elements, the column is the second parameter to be +specified (after the comma). The first parameter, is now replaced +with a ``:`` to say, that we want all the elements of that +dimension, instead of one particular element. We access the third +column by + +:: + + C[:, 2] + +%%1%% Pause the video here and change the last column of C to +zeroes and then resume the video. + +:: + + C[:, -1] = 0 + +Since A is one dimensional, rows and columns of A don't make much +sense. It has just one row and +:: + + A[:] + +gives the whole of A. + +%%2%% Pause the video here and change ``A`` to ``[11, 12, 13, 14, 15]`` +and then resume the video. + +To change A, we say +:: + + A[:] = [11, 12, 13, 14, 15] + +Now, that we know how to access, rows and columns of an array, we +shall learn how to access other pieces of an array. For this +purpose, we will be using image arrays. + +To read an image into an array, we use the ``imread`` command. We +shall use the image ``squares.png`` present in ``/home/fossee``. We +shall first navigate to that path in the OS and see what the image +contains. + +{{{ switch to the browser and show the image }}} + +{{{ switch back to the ipython terminal }}} + +Let us now read the data in ``squares.png`` into the array ``I``. +:: + + I = imread('/home/fossee/squares.png') + +We can see the contents of the image, using the command +``imshow``. We say, +:: + + imshow(I) + +to see what has been read into ``I``. + +To see that ``I`` is really, just an array, we say, +:: + + I + +at the prompt, and see that an array is displayed. + +To check the dimensions of any array, we can use the method +shape. We say +:: + + I.shape + +to get the dimensions of the image. As we can see, ``squares.png`` +has the dimensions of 300x300. + +Our goal for this part of the tutorial would be to get the +top-left quadrant of the image. To do this, we need to access, a +few of the rows and a few of the columns of the array. + +To access, the third column of C, we said, ``C[:, 2]``. Essentially, +we are accessing all the rows in column three of C. Now, let us +modify this to access only the first three rows, of column three +of C. + +We say, +:: + + C[0:3, 2] + +to get the elements of rows indexed from 0 to 3, 3 not included +and column indexed 2. Note that, the index before the colon is +included and the index after it is not included, in the slice that +we have obtained. This is very similar to the ``range`` function, +where ``range`` returns a list, in which the upper limit or stop +value is not included. + +Now, if we wish to access the elements of row with index 2, and in +columns indexed 0 to 2 (included), we say, +:: + + C[2, 0:3] + +E%% %% Pause the video here, and first, obtain the elements [22, +23] from C. Then, obtain the elements [11, 21, 31, 41] from +C. Finally, obtain the elements [21, 31, 41, 0]. Then, resume the +video. +:: + + C[1, 1:3] + +gives the elements [22, 23] +:: + + C[0:4, 0] + +gives the elements [11, 21, 31, 41] +:: + + C[1:5, 0] + +gives the elements [21, 31, 41, 0] + +Note that when specifying ranges, if you are starting from or +going up-to the end, the corresponding element may be dropped. So, +in the previous example to obtain [11, 21, 31, 41], we could have +simply said, +:: + + C[:4, 0] + +and +:: + + C[1:, 0] + +gives the elements [21, 31, 41, 0]. If we skip both the indexes, +we get the slice from end to end, as we already know. + +E%% %% Pause the video here. Obtain the elements [[23, 24], [33, +-34]] and then resume the video. +:: + + C[1:3, 2:4] + +gives us the elements, [[23, 24], [33, -34]]. + +Now, we wish to obtain the top left quarter of the image. How do +we go about doing it? Since, we know the shape of the image to be +300, we know that we need to get the first 150 rows and first 150 +columns. +:: + + I[:150, :150] + +gives us the top-left corner of the image. + +We use the ``imshow`` command to see the slice we obtained in the +form of an image and confirm. +:: + + imshow(I[:150, :150]) + +E%% %% Pause the video here, and obtain the square in the center +of the image. +:: + + imshow(I[75:225, 75:225]) + +Our next goal is to compress the image, using a very simple +technique to reduce the space that the image takes on disk while +not compromising too heavily on the image quality. The idea is to +drop alternate rows and columns of the image and save it. This way +we will be reducing the data to a fourth of the original data but +losing only so much of visual information. + +We shall first learn the idea of striding using the smaller array +C. Suppose we wish to access only the odd rows and columns (first, +third, fifth). We do this by, +:: + + C[0:5:2, 0:5:2] + +if we wish to be explicit, or simply, +:: + + C[::2, ::2] + +This is very similar to the step specified to the ``range`` +function. It specifies, the jump or step in which to move, while +accessing the elements. If no step is specified, a default value +of 1 is assumed. +:: + + C[1::2, ::2] + +gives the elements, [[21, 23, 0], [41, 43, 0]] + +E%% %% Pause the video here, and obtain the following. +[[12, 0], [42, 0]] +[[12, 13, 14], [0, 0, 0]] +Then, resume the video. +:: + + C[::3, 1::3] + +gives the elements [[12, 0], [42, 0]] +:: + + C[::4, 1:4] + +gives the elements [[12, 13, 14], [0, 0, 0]] + +Now, that we know how to stride over an image, we can drop +alternate rows and columns out of the image in I. +:: + + I[::2, ::2] + +To see this image, we say, +:: + + imshow(I[::2, ::2]) + +This does not have much data to notice any real difference, but +notice that the scale has reduced to show that we have dropped +alternate rows and columns. If you notice carefully, you will be +able to observe some blurring near the edges. To notice this +effect more clearly, increase the step to 4. +:: + + imshow(I[::4, ::4]) + +{{{ show summary slide }}} + +That brings us to the end of this tutorial. In this tutorial, we +have learnt to access parts of arrays, specifically individual +elements, rows and columns and larger pieces of arrays. We have +also learnt how to modify arrays, element wise or in larger +pieces. + +Thank You! diff -r 234b393cbc85 -r 4032df8f6227 advanced-features-functions.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/advanced-features-functions.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,4 @@ +======== + Script +======== + diff -r 234b393cbc85 -r 4032df8f6227 getting-started-files.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/getting-started-files.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,147 @@ +======== + Script +======== + +Welcome to the tutorial on getting started with files. + +{{{ Screen shows welcome slide }}} + +{{{ Show the outline for this tutorial }}} + +In this tutorial we shall learn to read files, and do some basic +actions on the file, like opening and reading a file, closing a +file, iterating through the file line-by-line, and appending the +lines of a file to a list. + +{{{ switch back to the terminal }}} + +As usual, we start IPython, using +:: + + ipython -pylab + +Let us first open the file, ``pendulum.txt`` present in +``/home/fossee/``. +:: + + f = open('/home/fossee/pendulum.txt') + +``f`` is called a file object. Let us type ``f`` on the terminal to +see what it is. +:: + + f + +The file object shows, the file which is open and the mode (read +or write) in which it is open. + +We shall first learn to read the whole file into a single +variable. Later, we shall look at reading it line-by-line. We use +the ``read`` method of ``f`` to read, all the contents of the file +into the variable ``pend``. +:: + + pend = f.read() + +Now, let us see what is in ``pend``, by typing +:: + + print pend + +We can see that ``pend`` has all the data of file. Type just ``pend`` +to see more explicitly, what it contains. +:: + + pend + +%%1%% Pause the video here and split the variable into a list, +``pend_list``, of the lines in the file and then resume the +video. Hint, use the tab command to see what methods the string +variable has. + +#[punch: should this even be put? add dependency to strings LO, +where we mention that strings have methods for manipulation. hint: +use splitlines()] +:: + + pend_list = pend.splitlines() + + pend_list + +Now, let us learn to read the file line-by-line. But, before that +we will have to close the file, since the file has already been +read till the end. +#[punch: should we mention file-pointer?] + +Let us close the file opened into f. +:: + + f.close() + +Let us again type ``f`` on the prompt to see what it shows. +:: + + f + +Notice, that it now says the file has been closed. It is a good +programming practice to close any file objects that we have +opened, after their job is done. + +Let us, now move on to reading files line-by-line. + +%%1%% Pause the video here and re-open the file ``pendulum.txt`` +with ``f`` as the file object, and then resume the video. + +We just use the up arrow until we reach the open command and issue +it again. +:: + + f = open('/home/fossee/pendulum.txt') + +Now, to read the file line-by-line, we iterate over the file +object line-by-line, using the ``for`` command. Let us iterate over +the file line-wise and print each of the lines. +:: + + for line in f: + print line + +As we already know, ``line`` is just a dummy variable, and not a +keyword. We could have used any other variable name, but ``line`` +seems meaningful enough. + +Instead of just printing the lines, let us append them to a list, +``line_list``. We first initialize an empty list, ``line_list``. +:: + + line_list = [ ] + +Let us then read the file line-by-line and then append each of the +lines, to the list. We could, as usual close the file using +``f.close`` and re-open it. But, this time, let's leave alone the +file object ``f`` and directly open the file within the for +statement. This will save us the trouble of closing the file, each +time we open it. + +for line in open('/home/fossee/pendulum.txt'): +line_list.append(line) + +Let us see what ``line_list`` contains. +:: + + line_list + +Notice that ``line_list`` is a list of the lines in the file, along +with the newline characters. If you noticed, ``pend_list`` did not +contain the newline characters, because the string ``pend`` was +split on the newline characters. + +{{{ show the summary slide }}} + +That brings us to the end of this tutorial. In this tutorial we +have learnt to open and close files, read the data in the files as +a whole, using the read command or reading it line by line by +iterating over the file object. + +Thank you! + diff -r 234b393cbc85 -r 4032df8f6227 getting-started-ipython.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/getting-started-ipython.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,174 @@ +======== + Script +======== + +Welcome to so and so.. + + +This tutorial will cover the basic usage of the ``ipython`` +interpreter. The following topics would be covered. + +{{{ Show slide with outline of the session. }}} + +IPython is an enhanced Python interpreter that provides features like +tabcompletion, easier access to help and many other functionalities +which are not available in the vannila Python interpreter. + +First let us see how to invoke the ``ipython`` interpreter. + +We type +:: + + ipython + +at the terminal prompt to invoke the ipython interpreter. + +We get a prompt with ``In [1]:`` after getting some information about +the version of Python installed and some help commands. + +If you get an error saying something like ``ipython is not +installed``, refer to the tutorial on how to install the packages +required for this course. + +Now, to quit the ipython interpreter, type Ctrl-D. You are prompted +asking if you really want to exit, type y to say yes and quit ipython. + +Start ipython again, as you did before. + +The prompt that you have says ``In [1]``. ``In`` stands for input and the +ipython interpreter is ready to accept input from you. + +Now let us see, how we can type some commands into the interpreter. + +Start with the simplest thing, addition. + +Let's type +:: + 1+2 + +at the prompt. IPython promptly gives back the output as 3. Notice +that the output is displayed with an ``Out[1]`` indication. + +Let's try out few other mathematical operations. +:: + + 5 - 3 + 7 - 4 + 6 * 5 + +Now let's ``print 1+2``. Instead of typing the whole thing, we make +use of the fact that IPython remembers the history of the commands +that you have already used. We use the up arrow key to go back the +command ``1+2``. We then use the left-arrow key to navigate to the +beginning of the line and add the word ``print`` and a space. Then hit +enter and observe that the interpreter prints out the value as 3, +without the Out[] indication. + +Now, let's change the previous command ``print 1+2`` to ``print +10*2``. We use the up arrow again to navigate to the previous command +and use the left arrow key to move the cursor on to the + symbol and +then use the delete key to remove it and type 0 and * to change the +expression to the required one. We hit enter to see the output of +``print``. + +Now, let's say we want to use the function ``round``. We type ``ro`` +at the prompt and hit the tab key. As you can see, the IPython +completes the command. This feature is called the tab-completion. + +Now, we remove all the characters and just type ``r`` and then hit +tab. IPython does not complete the command since there are many +possibilities. It just lists out all the possible completions. + +%% %% Pause the video here and type ``ab`` and hit tab to see what +happens. Next, jut type ``a`` and hit tab to see what happens. + +``ab`` tab completes to ``abs`` and ``a`` gives us a list of all +the commands starting with a. + +Now, let's see what these functions are used for. We will use the +help features of ipython to find this out. + +To get the help of any function, we first type the function, ``abs`` +in our case and then add a ? at the end and hit enter. + +As the documentation says, ``abs`` accepts a number as an input and +returns it's absolute value. + +We say, +:: + + abs(-19) + + abs(19) + +We get 19, as expected, in both the cases. + +Does it work for decimals (or floats)? Let's try typing abs(-10.5) +and we do get back 10.5. + +%% %% Pause the video here, and look-up the documentation of ``round`` +and see how to use it. + +:: + + round? + +If you notice, there are extra square brackets around the ``ndigits``. +This means that ``ndigits`` is optional and 0 is the default value. +Optional parameters are shown in square brackets anywhere in Python +documentation. + +The function ``round``, rounds a number to a given precision. + +%% %% Pause the video here and check the output of +round(2.48) +round(2.48, 1) +round(2.48, 2) +and then resume the video. + +:: + round(2.484) + round(2.484, 1) + round(2.484, 2) + +We get 2.0, 2.5 and 2.48, which are what we expect. + +Let's now see how to correct typing errors that we make when typing at +the terminal. As already shown, if we haven't hit the enter key +already, we could navigate using the arrow keys and make deletions +using delete or backspace key and correct the errors. + +Let's now type round(2.484 and hit enter, without closing the +parenthesis. We get a prompt with dots. This prompt is the +continuation prompt of ``ipython``. It appears, the previous line is +incomplete in some way. We now complete the command by typing, the +closing parenthesis and hitting enter. We get the expected output of +2.5. + +In other instances, if we commit a typing error with a longer and more +complex expression and end up with the continuation prompt, we can +type Ctrl-C to interrupt the command and get back the ``ipython`` input +prompt. + +%% %% Pause the video here. +Try typing round(2.484, and hit enter. and then cancel the command +using Ctrl-C. Then, type the command, round(2.484, 2) and resume the +video. + +:: + + round(2.484 + ^C + + round(2.484, 2) + +This brings us to the end of the tutorial on getting started with +``ipython``. + +In this tutorial we have seen +{{{ show the outline/summary slide. }}} + +Thank you! + + + diff -r 234b393cbc85 -r 4032df8f6227 loading-data-from-files.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/loading-data-from-files.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,137 @@ +======== + Script +======== + +Welcome to this tutorial on loading data from files. + +{{{ Screen shows welcome slide }}} + +Until now, all the plots we have made use analytic functions. We have +been using analytic functions to generate a sequence of points and +plotting them, against another sequence of points. But, this is not +what we do most often. We often require to plot points obtained from +experimental observations. + +#[punch: the initial part of the paragraph may be removed, to make +this a more generic LO?] + +In this tutorial we shall learn to read data from files and save it +into sequences that can later be used to plot. + +{{{ Show the outline for this tutorial }}} + +We shall use the ``loadtxt`` command to load data from files. We will +be looking at how to get multiple columns of data into multiple +sequences. + +{{{ switch back to the terminal }}} + +As usual, let us start IPython, using +:: + + ipython -pylab + +Now, Let us begin with reading the file primes.txt, which contains +just a list of primes listed in a column, using the loadtxt command. +The file, in our case, is present in ``/home/fossee/primes.txt``. + +#[punch: do we need a slide for showing the path?] + +We use the ``cat`` command to see the contents of this file. + +#[punch: should we show the cat command here? seems like a good place +to do it] :: + + cat /home/fossee/primes.txt + +Now let us read this list into the variable ``primes``. +:: + + primes = loadtxt('/home/fossee/primes.txt') + +``primes`` is now a sequence of primes, that was listed in the file, +``primes.txt``. + +We now type, ``print primes`` to see the sequence printed. + +We observe that all of the numbers end with a period. This is so, +because these numbers are actually read as ``floats``. We shall learn +about them, later. + +Now, let us use the ``loadtxt`` command to read a file that contains +two columns of data, ``pendulum.txt``. This file contains the length +of the pendulum in the first column and the corresponding time period +in the second. + +%%1%% Pause the video here, and use the ``cat`` command to view the +contents of this file and then resume the video. + +This is how we look at the contents of the file, ``pendulum.txt`` +:: + + cat /home/fossee/pendulum.txt + +Let us, now, read the data into the variable ``pend``. Again, it is +assumed that the file is in ``/home/fossee/`` +:: + + pend = loadtxt('/home/fossee/pendulum.txt') + +Let us now print the variable ``pend`` and see what's in it. +:: + + print pend + +Notice that ``pend`` is not a simple sequence like ``primes``. It has +two sequences, containing both the columns of the data file. Let us +use an additional argument of the ``loadtxt`` command, to read it into +two separate, simple sequences. +:: + + L, T = loadtxt('/home/fossee/pendulum.txt', unpack=True) + +Let us now, print the variables L and T, to see what they contain. +:: + + print L + print T + +Notice, that L and T now contain the first and second columns of data +from the data file, ``pendulum.txt``, and they are both simple +sequences. + +{{{ show the slide with loadtxt --- other features }}} + +In this tutorial, we have learnt the basic use of the ``loadtxt`` +command, which is capable of doing a lot more than we have used it for +until now, for example + +%%2%% Pause the video here, and read the file +``pendulum_semicolon.txt`` which contains the same data as +``pendulum.txt``, but the columns are separated by semi-colons instead +of spaces. Use the IPython help to see how to do this. Once you have +finished, resume the video to look at the solution. + +{{{ switch back to the terminal }}} +:: + + L, T = loadtxt('/home/fossee/pendulum.txt', unpack``True, delimiter``';') + + print L + + print T + +This brings us to the end of this tutorial. + +{{{ show the summary slide }}} + +You should now be able to do the following, comfortably. + + + Read data from files, containing a single column of data using the + ``loadtxt`` command. + + Read multiple columns of data, separated by spaces or other + delimiters. + +Thank you! + + diff -r 234b393cbc85 -r 4032df8f6227 loops.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/loops.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,4 @@ +======== + Script +======== + diff -r 234b393cbc85 -r 4032df8f6227 manipulating-strings.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/manipulating-strings.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,179 @@ +======== + Script +======== + +{{{ show the welcome slide }}} + +Welcome to this tutorial on manipulating strings. + +{{{ show the slide with outline }}} + +In this tutorial we shall learn to manipulate strings, specifically +slicing and reversing them, or replacing characters, converting from +upper to lower case and vice-versa + +#[punch: reversed returns an iterator. should we still teach it?] + +We have an ``ipython`` shell open, in which we are going to work, +through out this session. + +Let us consider a simple problem, and learn how to slice strings and +get sub-strings. + +Let's say the variable ``week`` has the list of the names of the days +of the week. + +:: + + week = ["sun", "mon", "tue", "wed", "thu", "fri", "sat"] + + +Now given a string ``s``, we should be able to check if the string is a +valid name of a day of the week or not. + +:: + + s = saturday + + +``s`` could be in any of the forms --- sat, saturday, Sat, Saturday, +SAT, SATURDAY. We shall now be solving the problem only for the forms, +sat and saturday. We shall solve it for the other forms, at the end of +the tutorial. + +{{{ show these forms in a slide }}} + +So, we need to check if the first three characters of the given string +exists in the variable ``week``. + +As, with any of the string data-types, strings can be sliced into +sub-strings. To get the first three characters of s, we say, + +:: + + s[0:3] + +Note that, we are slicing the string from the index 0 to index 3, 3 +not included. + +As we already know, the last element of the string can be accessed +using ``s[-1]``. + +%%1%% Pause the video here and obtain the sub-string excluding the +first and last characters from the string. + +:: + + s[1:-1] + +gives the a substring of s, without the first and the last +characters. + +:: + + s = saturday + s[:3] + +Now, we just check if that substring is present in the variable +``week``. + +:: + + s[:3] in week + +Let us now consider the problem of finding out if a given string is +palindromic or not. First of all, a palindromic string is a string +that remains same even when it has been reversed. + +Let the string given be ``malayalam``. + +:: + + s = "malayalam" + +Now, we need to compare this string with it's reverse. + +Again, we will use a technique common to all sequence data-types, +[::-1] + +So, we obtain the reverse of s, by simply saying, + +:: + + s[::-1] + +Now, to check if the string is ``s`` is palindromic, we say +:: + + s == s[::-1] + +As, expected, we get ``True``. + +Now, if the string we are given is ``Malayalam`` instead of +``malayalam``, the above comparison would return a False. So, we will +have to convert the string to all lower case or all upper case, before +comparing. Python provides methods, ``s.lower`` and ``s.upper`` to +achieve this. + +Let's try it out. +:: + + s = "Malayalam" + + s.upper() + + s + + s.lower() + + s.lower() == s.lower()[::-1] + +Note that these methods, do not change the original string, but return +a new string. + +a%% %% Pause the video here, and finish the problem of checking if +``s`` is a valid name of a day of the week and then resume the +video. Change the solution to this problem, to include forms like, +SAT, SATURDAY, Saturday and Sat. + +:: + + s.lower()[:3] in week + +We just convert any input string to lower case and then check if it is +present in the list ``week``. + +Now, let us consider another problem. We often encounter e-mail id's +which have @ and periods replaced with text, something like +info[at]fossee[dot]in. We now wish to get back proper e-mail +addresses. + +Let's say the variable email has the email address. +:: + + email = "info[at]fossee[dot]in" + +Now, we first replace the ``[at]`` with the ``@``, using the replace +method of strings. +:: + + email = email.replace("[at]", "@") + print email + +%%1%% Pause the video here and replace the ``[dot]`` with ``.`` and then +resume the video. + +:: + + email = email.replace("[dot]", ".") + print email + + +That brings us to the end of the tutorial. + +{{{ show summary slide }}} + +In this tutorial, we have learnt how to get substrings, reverse +strings and a few useful methods, namely upper, lower and replace. + +Thank You! diff -r 234b393cbc85 -r 4032df8f6227 module-assessment-arrays-matrices.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/module-assessment-arrays-matrices.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,88 @@ +======== + Script +======== + +Welcome. + +This spoken tutorial is a self-assessment tutorial and you will be +able to assess yourself on the concepts learnt in the Module on Arrays +and Matrices. + + +As with all other assessments we will first start with a few short +questions that will not take you more that 15 to 20 seconds to +answer. Then we shall move on to a bigger problem, that you are +expected to solve in less than 10 mins. + + + * Given a list of marks:: + + marks = [10, 20, 30, 50, 55, 75, 83] + + How will you convert it to an array? + + * What is the shape of the following array?:: + + x = array([[1,2,3,4], + [3,4,2,5]]) + + * What is the resulting array:: + + a = array([[1, 2], + [3, 4]]) + + a[1,0] = 0 + + * What is the resulting array?:: + + x = array(([1,2,3,4], + [2,3,4,5])) + + x[-2][-3] = 4 + + + * How do we change the array ``x = array([[1,2,3,4]])`` to + ``array([[1,2,0,4]])``? + + * How do we get the slice:: + + array([[2,3], + [4,2]]) + + out of the array:: + + x = array([[1,2,3,4], + [3,4,2,5]]) + + + * What is the output of x[::3,::3], when x is:: + + x = array([[9,18,27], + [30,60,90], + [14,7,1]]) + + * How do you get the transpose of this array?:: + + a = array([[1, 2], + [3, 4]]) + + * What is the output of the following?:: + + a = array([[1, 2], + [3, 4]]) + + b = array([[1, 1], + [2, 2]]) + + a*b + + +{{{ show slides with solutions to these problems }}} + +Now, let us move on to a larger problem. From the image +`tagore-einstein.png`` + + + extract the face of Einstein alone. + + extract the face of Tagore alone. + + get a smaller copy of the image, that is a fourth it's size. + diff -r 234b393cbc85 -r 4032df8f6227 plotting-data.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/plotting-data.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,137 @@ +Plotting Experimental Data +============================= +Hello and welcome , this tutorial on Plotting Experimental data is +presented by the fossee team. + +{{{ Show the slide containing title }}} + + +{{{ Show the Outline Slide }}} + +Here we will discuss plotting Experimental data. + +1.We will see how we can represent a sequence of numbers in Python. + +2.We will also become fimiliar with elementwise squaring of such a +sequence. + +3. We will also see how we can use our graph to indicate Error. + +One needs to be fimiliar with the concepts of plotting +mathematical functions in Python. + +We will use data from a Simple Pendulum Experiment to illustrate our +points. + +{{{ Simple Pendulum data Slide }}} + + + + +As we know for a simple pendulum length,L is directly proportional to +the square of time,T. We shall be plotting L and T^2 values. + + +First we will have to initiate L and T values. We initiate them as sequence +of values. To tell ipython a sequence of values we write the sequence in +comma seperated values inside two square brackets. This is also called List +so to create two sequences + +L,t type in ipython shell. :: + + In []: L = [0.1, 0.2, 0.3, 0.4, 0.5,0.6, 0.7, 0.8, 0.9] + + In []: t= [0.69, 0.90, 1.19,1.30, 1.47, 1.58, 1.77, 1.83, 1.94] + + + +To obtain the square of sequence t we will use the function square +with argument t.This is saved into the variable tsquare.:: + + In []: tsquare=square(t) + + array([ 0.4761, 0.81 , 1.4161, 1.69 , 2.1609, 2.4964, 3.1329, + 3.3489, 3.7636]) + + +Now to plot L vs T^2 we will simply type :: + + In []: plot(L,t,.) + +'.' here represents to plot use small dots for the point. :: + + In []: clf() + +You can also specify 'o' for big dots.:: + + In []: plot(L,t,o) + + In []: clf() + + +{{{ Slide with Error data included }}} + + +Now we shall try and take into account error into our plots . The +Error values for L and T are on your screen.We shall again intialize +the sequence values in the same manner as we did for L and t :: + + In []: delta_L= [0.08,0.09,0.07,0.05,0.06,0.00,0.06,0.06,0.01] + + In []: delta_T= [0.04,0.08,0.11,0.05,0.03,0.03,0.01,0.07,0.01] + + + +Now to plot L vs T^2 with an error bar we use the function errorbar() + +The syntax of the command is as given on the screen. :: + + + In []: errorbar(L,tsquare,xerr=delta_L, yerr=delta_T, fmt='b.') + +This gives a plot with error bar for x and y axis. The dots are of +blue color. + + +similarly we can draw the same error bar with big red dots just change +the parameters to fmt to 'ro'. :: + + In []: clf() + In []: errorbar(L,tsquare,xerr=delta_L, yerr=delta_T, fmt='ro') + + + +thats it. you can explore other options to errorbar using the documentation +of errorbar.:: + + In []: errorbar? + + +{{{ Summary Slides }}} + +In this tutorial we have learnt : + +1. How to declare a sequence of number , specifically the kind of sequence we learned was a list. + +2. Plotting experimental data extending our knowledge from mathematical functions. + +3. The various options available for plotting dots instead of lines. + +4. Plotting experimental data such that we can also represent error. We did this using the errorbar() function. + + + {{{ Show the "sponsored by FOSSEE" slide }}} + + + +This tutorial was created as a part of FOSSEE project. + +Hope you have enjoyed and found it useful. + + Thankyou + + + +Author : Amit Sethi +Internal Reviewer : +Internal Reviewer 2 : diff -r 234b393cbc85 -r 4032df8f6227 plotui.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/plotui.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,177 @@ +Hello and welcome to the tutorial on creating simple plots using +Python.This tutorial is presented by the Fossee group. +{{{ Show the Title Slide }}} + +I hope you have IPython running on your computer. + +In this tutorial we will look at plot command and also how to study +the plot using the UI. + +{{{ Show Outline Slide }}} + +Lets start ipython on your shell, type :: + + $ipython -pylab + + +Pylab is a python library which provides plotting functionality.It +also provides many other important mathematical and scientific +functions. After running IPython -pylab in your shell if at the top of +the result of this command, you see something like :: + + + `ERROR: matplotlib could NOT be imported! Starting normal + IPython.` + + +{{{ Slide with Error written on it }}} + +Then you have to install matplotlib and run this command again. + +Now type in your ipython shell :: + + In[]: linpace? + + + +as the documentation says, it returns `num` evenly spaced samples, +calculated over the interval start and stop. To illustrate this, lets +do it form 1 to 100 and try 100 points. :: + + In[]: linspace(1,100,100) + +As you can see a sequence of numbers from 1 to 100 appears. + +Now lets try 200 points between 0 and 1 you do this by typing :: + + + In[]: linspace(0,1,200) + +0 for start , 1 for stop and 200 for no of points. In linspace +the start and stop points can be integers, decimals , or +constants. Let's try and get 100 points between -pi to pi. Type :: + + In[]: p = linspace(-pi,pi,100) + + +'pi' here is constant defined by pylab. Save this to the variable, p +. + +If you now :: + + In[]: len(p) + +You will get the no. of points. len function gives the no of elements +of a sequence. + + +Let's try and plot a cosine curve between -pi and pi using these +points. Simply type :: + + + In[]: plot(p,cos(points)) + +Here cos(points) gets the cosine value at every corresponding point to +p. + + +We can also save cos(points) to variable cosine and plot it using +plot.:: + + In[]: cosine=cos(points) + + In[]: plot(p,cosine) + + + +Now do :: + + In[]: clf() + +this will clear the plot. + +This is done because any other plot we try to make shall come on the +same drawing area. As we do not wish to clutter the area with +overlaid plots , we just clear it with clf(). Now lets try a sine +plot. :: + + + In []: plot(p,sin(p)) + + + + +The Window on which the plot appears can be used to study it better. + +First of all moving the mouse around gives us the point where mouse +points at. + +Also we have some buttons the right most among them is +for saving the file. + +Just click on it specifying the name of the file. We will save the plot +by the name sin_curve in pdf format. + +{{{ Action corelating with the words }}} + +As you can see I can specify format of file. +Left to the save button is the slider button to specify the margins. + +{{{ Action corelating with the words }}} + +Left to this is zoom button to zoom into the plot. Just specify the +region to zoom into. +The button left to it can be used to move the axes of the plot. + +{{{ Action corelating with the words }}} + +The next two buttons with a left and right arrow icons change the state of the +plot and take it to the previous state it was in. It more or less acts like a +back and forward button in the browser. + +{{{ Action corelating with the words }}} + +The last one is 'home' referring to the initial plot. + +{{{ Action corelating with the words}}} + + + +{{{ Summary Slide }}} + + +In this tutorial we have looked at + +1. Starting Ipython with pylab + +2. Using linspace function to create `num` equaly spaced points in a region. + +3. Finding length of sequnces using len. + +4. Plotting mathematical functions using plot. + +4. Clearing drawing area using clf + +5. Using the UI of plot for studying it better . Using functionalities like save , zoom , moving the plots on x and y axis + +etc .. + + + +{{{ Show the "sponsored by FOSSEE" slide }}} + + + +This tutorial was created as a part of FOSSEE project, NME ICT, MHRD India + + + + Hope you have enjoyed and found it useful. + + Thankyou + + + +Author : Amit Sethi +Internal Reviewer : +Internal Reviewer 2 : diff -r 234b393cbc85 -r 4032df8f6227 symbolics.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/symbolics.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,248 @@ +Symbolics with Sage +------------------- + +This tutorial on using Sage for symbolic calculation is brought to you +by Fossee group. + +{{{ Part of Notebook with title }}} + +We would be using simple mathematical functions on the sage notebook +for this tutorial . + +During the course of the tutorial we will learn + + +{{{ Part of Notebook with outline }}} + +To define symbolic expressions in sage . Use built-in costants and +function. Integration , differentiation using sage . Defining +matrices. Defining Symbolic functions . Simplifying and solving +symbolic expressions and functions + + + +Using sage we can perform mathematical operations on symbols . + +On the sage notebook type:: + + sin(y) + +It raises a name error saying that y is not defined . But in sage we +can declare y as a symbol using var function. :: + + var('y') + +Now if you type:: + + sin(y) + + sage simply returns the expression . + +thus now sage treats sin(y) as a symbolic expression . You can use +this to do a lot of symbolic maths using sage's built-in constants and +expressions . + +Try out :: + + var('x,alpha,y,beta') x^2/alpha^2+y^2/beta^2 + +Similarly , we can define many algebraic and trigonometric expressions +using sage . + + + +Sage also provides a few built-in constants which are commonly used in +mathematics . + +example : pi,e,oo , Function n gives the numerical values of all these + constants. + +For instance:: + + n(e) + + 2.71828182845905 + +gives numerical value of e. + +If you look into the documentation of n by doing :: + + n( + +You will see what all arguments it can take etc .. It will be very +helpful if you look at the documentation of all functions introduced + + +Also we can define the no of digits we wish to use in the numerical +value . For this we have to pass an argument digits. Type:: + + n(pi, digits = 10) + +Apart from the constants sage also has a lot of builtin functions like +sin,cos,sinh,cosh,log,factorial,gamma,exp,arcsin,arccos,arctan etc ... +lets try some out on the sage notebook. :: + + sin(pi/2) + + arctan(oo) + + log(e,e) + + +Given that we have defined variables like x,y etc .. , We can define +an arbitrary function with desired name in the following way.:: + + var('x') function( {{{ Just to show the documentation + extend this line }}} function('f',x) + +Here f is the name of the function and x is the independent variable . +Now we can define f(x) to be :: + + f(x) = x/2 + sin(x) + +Evaluating this function f for the value x=pi returns pi/2.:: + + f(pi) + +We can also define function that are not continuous but defined +piecewise. We will be using a function which is a parabola between 0 +to 1 and a constant from 1 to 2 . type the following as given on the +screen:: + + + var('x') h(x)=x^2 g(x)=1 f=Piecewise( {{{ Just to show the + documentation extend this line }}} + f=Piecewise([[(0,1),h(x)],[(1,2),g(x)]],x) f + +Checking f at 0.4, 1.4 and 3 :: f(0.4) f(1.4) f(3) + +for f(3) it raises a value not defined in domain error . + + +Apart from operations on expressions and functions one can also use +them for series . + +We first define a function f(n) in the way discussed above.:: + + var('n') function('f', n) + + +To sum the function for a range of discrete values of n, we use the +sage function sum. + + For a convergent series , f(n)=1/n^2 we can say :: + + var('n') function('f', n) + + f(n) = 1/n^2 + + sum(f(n), n, 1, oo) + +For the famous Madhava series :: var('n') function('f', n) + + f(n) = (-1)^(n-1)*1/(2*n - 1) + +This series converges to pi/4. It was used by ancient Indians to +interpret pi. + +For a divergent series, sum would raise a an error 'Sum is +divergent' :: + + var('n') + function('f', n) + f(n) = 1/n sum(f(n), n,1, oo) + + + + +We can perform simple calculus operation using sage + +For example lets try an expression first :: + + diff(x**2+sin(x),x) 2x+cos(x) + +The diff function differentiates an expression or a function . Its +first argument is expression or function and second argument is the +independent variable . + +We have already tried an expression now lets try a function :: + + f=exp(x^2)+arcsin(x) diff(f(x),x) + +To get a higher order differentiation we need to add an extra argument +for order :: + + diff( diff(f(x),x,3) + + +in this case it is 3. + + +Just like differentiation of expression you can also integrate them :: + + x = var('x') s = integral(1/(1 + (tan(x))**2),x) s + + + +To find factors of an expression use the function factor + + factor( y = (x^100 - x^70)*(cos(x)^2 + cos(x)^2*tan(x)^2) f = + factor(y) + +One can also simplify complicated expression using sage :: + f.simplify_full() + +This simplifies the expression fully . You can also do simplification +of just the algebraic part and the trigonometric part :: + + f.simplify_exp() f.simplify_trig() + + +One can also find roots of an equation by using find_root function:: + + phi = var('phi') find_root(cos(phi)==sin(phi),0,pi/2) + +Lets substitute this solution into the equation and see we were +correct :: + + var('phi') f(phi)=cos(phi)-sin(phi) + root=find_root(f(phi)==0,0,pi/2) f.substitute(phi=root) + + +as we can see the solution is almost equal to zero . + + +We can also define symbolic matrices :: + + + + var('a,b,c,d') A=matrix([[a,1,0],[0,b,0],[0,c,d]]) A + + +Now lets do some of the matrix operations on this matrix :: + + + A.det() A.inverse() + +You can do :: + + A. + +To see what all operations are available + + +{{{ Part of the notebook with summary }}} + +So in this tutorial we learnt how to + + +We learnt about defining symbolic expression and functions . +And some built-in constants and functions . +Getting value of built-in constants using n function. +Using Tab to see the documentation. +Also we learnt how to sum a series using sum function. +diff() and integrate() for calculus operations . +Finding roots , factors and simplifying expression using find_root(), +factor() , simplify_full, simplify_exp , simplify_trig . +Substituting values in expression using substitute function. +And finally creating symbolic matrices and performing operation on them . diff -r 234b393cbc85 -r 4032df8f6227 using-sage.rst --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/using-sage.rst Fri Sep 17 14:32:10 2010 +0530 @@ -0,0 +1,119 @@ +======== + Script +======== + +{{{ show the welcome slide }}} + +Welcome to this tutorial on using Sage. + +{{{ show the slide with outline }}} + +In this tutorial we shall quickly look at a few examples of the areas +(name the areas, here) in which Sage can be used and how it can be +used. + +{{{ show the slide with Calculus outline }}} + +Let us begin with Calculus. We shall be looking at limits, +differentiation, integration, and Taylor polynomial. + +{{{ show sage notebook }}} + +We have our Sage notebook running. In case, you don't have it running, +start is using the command, ``sage --notebook``. + +To find the limit of the function x*sin(1/x), at x=0, we say:: + + lim(x*sin(1/x), x=0) + +We get the limit to be 0, as expected. + +It is also possible to the limit at a point from one direction. For +example, let us find the limit of 1/x at x=0, when approaching from +the positive side.:: + + lim(1/x, x=0, dir='above') + +To find the limit from the negative side, we say,:: + + lim(1/x, x=0, dir='above') + +Let us now see how to differentiate, using Sage. We shall find the +differential of the expression ``exp(sin(x^2))/x`` w.r.t ``x``. We +shall first define the expression, and then use the ``diff`` function +to obtain the differential of the expression.:: + + var('x') + f = exp(sin(x^2))/x + + diff(f, x) + +We can also obtain the partial differentiation of an expression w.r.t +one of the variables. Let us differentiate the expression +``exp(sin(y - x^2))/x`` w.r.t x and y.:: + + var('x y') + f = exp(sin(y - x^2))/x + + diff(f, x) + + diff(f, y) + +Now, let us look at integration. We shall use the expression obtained +from the differentiation that we did before, ``diff(f, y)`` --- +``e^(sin(-x^2 + y))*cos(-x^2 + y)/x``. The ``integrate`` command is +used to obtain the integral of an expression or function.:: + + integrate(e^(sin(-x^2 + y))*cos(-x^2 + y)/x, y) + +We get back the correct expression. The minus sign being inside or +outside the ``sin`` function doesn't change much. + +Now, let us find the value of the integral between the limits 0 and +pi/2. :: + + integral(e^(sin(-x^2 + y))*cos(-x^2 + y)/x, y, 0, pi/2) + +Let us now see how to obtain the Taylor expansion of an expression +using sage. Let us obtain the Taylor expansion of ``(x + 1)^n`` up to +degree 4 about 0.:: + + var('x n') + taylor((x+1)^n, x, 0, 4) + +This brings us to the end of the features of Sage for Calculus, that +we will be looking at. For more, look at the Calculus quick-ref from +the Sage Wiki. + +Next let us move on to Matrix Algebra. + +{{{ show the equation on the slides }}} + +Let us begin with solving the equation ``Ax = v``, where A is the +matrix ``matrix([[1,2],[3,4]])`` and v is the vector +``vector([1,2])``. + +To solve the equation, ``Ax = v`` we simply say:: + + x = solve_right(A, v) + +To solve the equation, ``xA = v`` we simply say:: + + x = solve_left(A, v) + +The left and right here, denote the position of ``A``, relative to x. + + + +Now, let us look at Graph Theory in Sage. + +Graph: G = Graph({0:[1,2,3], 2:[4]}) +Directed Graph: DiGraph(dictionary) +Graph families: graphs. tab +Invariants: G.chromatic polynomial(), G.is planar() +Paths: G.shortest path() +Visualize: G.plot(), G.plot3d() +Automorphisms: G.automorphism group(), G1.is isomorphic(G2), G1.is subgraph(G2) + +Now let us look at bits and pieces of Number theory, combinatorics, +